Judith Bernett

Professur für Biomedical Network Science

Mapping drug mechanisms with ProteomicsDB: unified omics and cell sensitivity data at scale (2026) Picciani M, Soleymaniniya A, Müller J, Sakhteman A, Tzanakis K, Bernett J, Kahl E, et al. Journal article Reticulated platelets in coronary artery disease: a multidimensional approach unveils prothrombotic signalling and novel therapeutic targets (2025) Kirmes K, Han J, Klug M, Bloxham CJ, Babyak O, Bernett J, Arend L, et al. Journal article Refinement strategies for Tangram for reliable single-cell to spatial mapping (2025) Stahl M, Straßer LJ, Lio CT, Bernett J, Röttger R, List M Journal article From Hype to Health Check: Critical Evaluation of Drug Response Prediction Models with DrEval (2025) Bernett J, Iversen P, Picciani M, Wilhelm M, Baum K, List M Unpublished / Preprint Deep learning models for unbiased sequence-based PPI prediction plateau at an accuracy of 0.65 (2025) Reim T, Hartebrodt A, Blumenthal DB, Bernett J, List M Journal article, Original article Guiding questions to avoid data leakage in biological machine learning applications (2024) Bernett J, Blumenthal DB, Grimm DG, Haselbeck F, Joeres R, Kalinina OV, List M Journal article Machine Learning and Artificial Intelligence in Drug Repurposing—Challenges and Perspectives (2024) Anokian E, Bernett J, Freeman A, List M, Prieto Santamaría L, Tanoli Z, Bonnin S Journal article Cracking the black box of deep sequence-based protein-protein interaction prediction (2024) Bernett J, Blumenthal DB, List M Journal article, Original article Robust disease module mining via enumeration of diverse prize-collecting Steiner trees (2022) Bernett J, Krupke D, Sadegh S, Baumbach J, Fekete SP, Kacprowski T, List M, Blumenthal DB Journal article A systematic comparison of novel and existing differential analysis methods for CyTOF data (2022) Arend L, Bernett J, Manz Q, Klug M, Lazareva O, Baumbach J, Bongiovanni D, List M Journal article