Challenges and Experiences Extending the cBioPortal for Cancer Genomics to a Molecular Tumor Board Platform.

Reimer N, Unberath P, Busch H, Börries M, Metzger P, Ustjanzew A, Renner C, Prokosch HU, Christoph J (2021)

Publication Type: Journal article

Publication year: 2021

Journal

Studies in health technology and informatics IOS Press; 1999

Book Volume: 287

Pages Range: 139-143

DOI: 10.3233/SHTI210833

Abstract

In Molecular Tumor Boards (MTBs), therapy recommendations for cancer patients are discussed. To aid decision-making based on the patient's molecular profile, the research platform cBioPortal was extended based on users' requirements. Additionally, a comprehensive dockerized workflow was developed to support the deployment of cBioPortal and connected services. In this work, we present the challenges and experiences of nearly two years of implementing and deploying an MTB platform based on cBioPortal and compare those to findings of a previous study.

Authors with CRIS profile

Philipp Unberath Lehrstuhl für Medizinische Informatik Hans-Ulrich Prokosch Lehrstuhl für Medizinische Informatik Jan Christoph Lehrstuhl für Medizinische Informatik

Involved external institutions

Universität zu Lübeck DE Germany (DE) Universitätsklinikum Freiburg DE Germany (DE) Universitätsmedizin der Johannes Gutenberg-Universität Mainz DE Germany (DE)

How to cite

APA:

Reimer, N., Unberath, P., Busch, H., Börries, M., Metzger, P., Ustjanzew, A.,... Christoph, J. (2021). Challenges and Experiences Extending the cBioPortal for Cancer Genomics to a Molecular Tumor Board Platform. Studies in health technology and informatics, 287, 139-143. https://dx.doi.org/10.3233/SHTI210833

MLA:

Reimer, Niklas, et al. "Challenges and Experiences Extending the cBioPortal for Cancer Genomics to a Molecular Tumor Board Platform." Studies in health technology and informatics 287 (2021): 139-143.

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